Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AAO55443.1Negative regulator of flagellin synthesis FlgM, putative; See PMID:20190049 for expression data; similar to SP:P39809; identified by sequence similarity; putative. (104 aa)    
Predicted Functional Partners:
fliA
Motility sigma factor FliA; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor controls the expression of flagella-related genes; Belongs to the sigma-70 factor family. FliA subfamily.
 
 0.998
AAO55442.1
Conserved protein of unknown function; Identified by Glimmer2; putative; see PMID:20190049 for expression data; identified by Glimmer.
  
  
 0.988
fliS
Flagellar protein FliS; See PMID:20190049 for expression data; similar to SP:P26608; identified by sequence similarity; putative.
 
 
 0.988
AAO55444.1
Flagellar protein, putative; Involved in the assembly process of the P-ring formation. It may associate with FlgF on the rod constituting a structure essential for the P-ring assembly or may act as a modulator protein for the P- ring assembly; Belongs to the FlgA family.
 
  
 0.979
flgB
Flagellar basal-body rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.
 
  
 0.968
flgK
Flagellar hook-associated protein FlgK; See PMID:20190049 for expression data; similar to GP:13183733, and SP:P33235; identified by sequence similarity; putative; Belongs to the flagella basal body rod proteins family.
 
  
 0.968
fliD
Flagellar hook-associated protein FliD; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end.
 
  
 0.961
flgJ
Peptidoglycan hydrolase FlgJ; See PMID:20190049 for expression data; similar to SP:P75942; identified by sequence similarity; putative.
 
  
 0.953
flgD
Basal-body rod modification protein FlgD; Required for flagellar hook formation. May act as a scaffolding protein.
  
  
 0.941
AAO55445.1
Chemotaxis protein CheV, putative; See PMID:20190049 for expression data.
 
  
 0.938
Your Current Organism:
Pseudomonas syringae tomato
NCBI taxonomy Id: 223283
Other names: P. syringae pv. tomato str. DC3000, Pseudomonas syringae DC3000, Pseudomonas syringae pv. tomato DC3000, Pseudomonas syringae pv. tomato str. ATCC BAA-871, Pseudomonas syringae pv. tomato str. DC3000
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