Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
AAO55481.1STAS domain protein; See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF01740. (100 aa)    
Predicted Functional Partners:
AAO55482.1
Response regulator; See PMID:20190049 for expression data; identified by match to TIGR protein family HMM TIGR01818.
 
 0.999
AAO55443.1
Negative regulator of flagellin synthesis FlgM, putative; See PMID:20190049 for expression data; similar to SP:P39809; identified by sequence similarity; putative.
 
 
  0.927
AAO55483.1
Hpt domain protein; See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF01627.
 
  
 0.923
fliG
Flagellar motor switch protein FliG; FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation.
 
   0.921
fliF
Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family.
 
    0.902
AAO55478.1
Flagellar assembly protein Flih, putative; See PMID:20190049 for expression data; similar to GP:9947020, and SP:P31068; identified by sequence similarity; putative.
 
    0.888
AAO55480.1
Flagellar protein FliJ, putative; See PMID:20190049 for expression data; similar to SP:P52613; identified by sequence similarity; putative.
 
     0.856
fliE
Flagellar hook-basal body complex protein FliE; See PMID:20190049 for expression data; similar to SP:P25797; identified by sequence similarity; putative.
 
    0.850
fliK
Flagellar hook-length control protein FliK; See PMID:20190049 for expression data; similar to GP:5921668, and SP:P52614; identified by sequence similarity; putative.
 
    0.821
fliI
Flagellum-specific ATP synthase FliI; See PMID:20190049 for expression data; similar to SP:P52612; identified by sequence similarity; putative.
  
    0.808
Your Current Organism:
Pseudomonas syringae tomato
NCBI taxonomy Id: 223283
Other names: P. syringae pv. tomato str. DC3000, Pseudomonas syringae DC3000, Pseudomonas syringae pv. tomato DC3000, Pseudomonas syringae pv. tomato str. ATCC BAA-871, Pseudomonas syringae pv. tomato str. DC3000
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