STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AAO55482.1Response regulator; See PMID:20190049 for expression data; identified by match to TIGR protein family HMM TIGR01818. (568 aa)    
Predicted Functional Partners:
AAO55481.1
STAS domain protein; See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF01740.
 
 0.998
AAO55483.1
Hpt domain protein; See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF01627.
 
 0.995
gacS
Sensor histidine kinase/response regulator GacS.
 
 
0.985
AAO56213.1
Sensor histidine kinase/response regulator; See PMID:20190049 for expression data; identified by match to TIGR protein family HMM TIGR01817.
  
 
0.885
AAO55003.1
Sensory box histidine kinase/response regulator; Similar to GB:L07555, GB:Z30426, GB:Z30430, GB:Z30427, GB:Z30429, GB:Z30428, SP:Q07108, PID:291898, PID:397939, and PID:558352; identified by sequence similarity; putative.
 
 
0.874
AAO55830.1
Sensor histidine kinase/response regulator.
 
 
0.873
AAO57366.1
Sensory box histidine kinase/response regulator; Similar to GP:14626713; identified by sequence similarity; putative.
  
 
 0.869
fleS
Sensor histidine kinase FleS; See PMID:20190049 for expression data.
 
 
 0.863
AAO55840.1
Extracellular solute-binding protein/sensory box protein.
  
 
 0.863
AAO54803.1
Sensory box protein/response regulator; See PMID:20190049 for expression data.
  
 
0.859
Your Current Organism:
Pseudomonas syringae tomato
NCBI taxonomy Id: 223283
Other names: P. syringae pv. tomato str. DC3000, Pseudomonas syringae DC3000, Pseudomonas syringae pv. tomato DC3000, Pseudomonas syringae pv. tomato str. ATCC BAA-871, Pseudomonas syringae pv. tomato str. DC3000
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