Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AAO55483.1Hpt domain protein; See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF01627. (118 aa)    
Predicted Functional Partners:
AAO55482.1
Response regulator; See PMID:20190049 for expression data; identified by match to TIGR protein family HMM TIGR01818.
 
 0.996
AAO58297.1
Sensor histidine kinase/response regulator RetS; See PMID:20190049 for expression data.
 
 
 0.962
AAO55302.1
Sensor histidine kinase/response regulator; See PMID:20190049 for expression data.
 
 0.946
AAO55728.1
Sensor histidine kinase/response regulator; Similar to GP:3953516; identified by sequence similarity; putative.
  
 0.938
AAO55481.1
STAS domain protein; See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF01740.
 
  
 0.923
fliG
Flagellar motor switch protein FliG; FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation.
  
  
 0.824
fliF
Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family.
  
  
 0.814
AAO55478.1
Flagellar assembly protein Flih, putative; See PMID:20190049 for expression data; similar to GP:9947020, and SP:P31068; identified by sequence similarity; putative.
  
    0.813
AAO55634.1
Response regulator; See PMID:20190049 for expression data.
 
  
 0.803
AAO55635.1
Anti-anti-sigma factor, putative; See PMID:20190049 for expression data.
 
  
 0.803
Your Current Organism:
Pseudomonas syringae tomato
NCBI taxonomy Id: 223283
Other names: P. syringae pv. tomato str. DC3000, Pseudomonas syringae DC3000, Pseudomonas syringae pv. tomato DC3000, Pseudomonas syringae pv. tomato str. ATCC BAA-871, Pseudomonas syringae pv. tomato str. DC3000
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