Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AAO55505.1CheW domain protein; See PMID:20190049 for expression data; similar to GP:2853605; identified by sequence similarity; putative. (295 aa)    
Predicted Functional Partners:
cheW-2
Chemotaxis protein CheW; Similar to SP:P07365; identified by sequence similarity; putative; see PMID:20190049 for expression data; similar to SP:P07365, identified by sequence similarity, putative.
 
 
 0.988
cheA-2
Chemotaxis sensor histidine kinase CheA; See PMID:20190049 for expression data.
 
 0.978
AAO55504.1
ParA family protein; See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF00991.
 
 
 0.978
cheZ
Chemotaxis protein CheZ; Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P).
 
  
 0.977
aer-2
Aerotaxis receptor; See PMID:20190049 for expression data.
 
 0.965
aer-1
Aerotaxis receptor; See PMID:20190049 for expression data; similar to GP:4545127, and GP:4545127; identified by sequence similarity; putative.
 
 0.958
AAO55507.1
Conserved protein of unknown function; See PMID:20190049 for expression data; identified by Glimmer.
 
  
 0.955
AAO55445.1
Chemotaxis protein CheV, putative; See PMID:20190049 for expression data.
  
 0.953
AAO56999.1
Chemotaxis protein CheV, putative; Similar to SP:P37599; identified by sequence similarity; putative; see PMID:20190049 for expression data; similar to SP:P37599, identified by sequence similarity, putative.
 
 
 0.944
cheA-1
Chemotaxis sensor histidine kinase CheA; See PMID:20190049 for expression data; similar to SP:P29072, GB:U00020, and PID:467140; identified by sequence similarity; putative.
  
 0.942
Your Current Organism:
Pseudomonas syringae tomato
NCBI taxonomy Id: 223283
Other names: P. syringae pv. tomato str. DC3000, Pseudomonas syringae DC3000, Pseudomonas syringae pv. tomato DC3000, Pseudomonas syringae pv. tomato str. ATCC BAA-871, Pseudomonas syringae pv. tomato str. DC3000
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