STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AAO55518.1Prevent-host-death family protein; Antitoxin component of a type II toxin-antitoxin (TA) system. (83 aa)    
Predicted Functional Partners:
AAO55517.1
PIN domain protein; See PMID:20190049 for expression data; similar to GP:14523315; identified by sequence similarity; putative.
 
   
 0.954
AAO54589.1
Conserved protein of unknown function; See PMID:20190049 for expression data; similar to GP:18076035; identified by sequence similarity; putative.
      
 0.846
AAO55986.1
Conserved domain protein; See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF01966.
      
 0.846
AAO53881.1
Conserved hypothetical protein.
  
 
 0.768
sdhE
Conserved protein of unknown function; An FAD assembly protein, which accelerates covalent attachment of the cofactor into other proteins. Plays an essential role in the assembly of succinate dehydrogenase (SDH, respiratory complex II), an enzyme complex that is a component of both the tricarboxylic acid cycle and the electron transport chain, and which couples the oxidation of succinate to fumarate with the reduction of ubiquinone (coenzyme Q) to ubiquinol. Required for flavinylation (covalent attachment of FAD) of the flavoprotein subunit SdhA of SDH and other flavinylated proteins a [...]
      
 0.698
AAO55515.1
Conserved hypothetical protein; Identified by Glimmer2; putative.
       0.615
AAO55516.1
FixG-related protein; Similar to SP:P18396; identified by sequence similarity; putative.
       0.604
AAO55514.1
Copper-translocating P-type ATPase; Identified by match to TIGR protein family HMM TIGR01522.
       0.591
AAO55512.1
Membrane protein, putative; Similar to GP:9947507; identified by sequence similarity; putative.
       0.590
ccoS
Cytochrome oxidase maturation protein, cbb3-type; Identified by match to PFAM protein family HMM PF03597.
       0.590
Your Current Organism:
Pseudomonas syringae tomato
NCBI taxonomy Id: 223283
Other names: P. syringae pv. tomato str. DC3000, Pseudomonas syringae DC3000, Pseudomonas syringae pv. tomato DC3000, Pseudomonas syringae pv. tomato str. ATCC BAA-871, Pseudomonas syringae pv. tomato str. DC3000
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