Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
AAO55609.1Conserved domain protein. (220 aa)    
Predicted Functional Partners:
AAO55607.1
Host specificity protein J, internal deletion; Similar to SP:P03749; identified by sequence similarity; putative.
       0.775
AAO55605.1
Hypothetical protein; Identified by Glimmer2; putative.
       0.773
AAO55606.1
Conserved hypothetical protein; Identified by Glimmer2; putative.
       0.773
AAO55608.1
Hypothetical protein; Identified by Glimmer2; putative.
       0.773
AAO55610.1
Tail fiber domain protein.
       0.682
AAO55604.1
Protein of unknown function; See PMID:20190049 for expression data; identified by Glimmer.
       0.541
AAO55611.1
Lysozyme, putative; Identified by match to PFAM protein family HMM PF00182.
       0.494
AAO55612.1
Conserved hypothetical protein; Similar to GP:16502197, and GP:16502197; identified by sequence similarity; putative.
       0.494
AAO55613.1
Conserved domain protein.
       0.479
AAO55614.1
Hypothetical protein; Identified by Glimmer2; putative.
       0.479
Your Current Organism:
Pseudomonas syringae tomato
NCBI taxonomy Id: 223283
Other names: P. syringae pv. tomato str. DC3000, Pseudomonas syringae DC3000, Pseudomonas syringae pv. tomato DC3000, Pseudomonas syringae pv. tomato str. ATCC BAA-871, Pseudomonas syringae pv. tomato str. DC3000
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