STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AAO55634.1Response regulator; See PMID:20190049 for expression data. (394 aa)    
Predicted Functional Partners:
AAO55635.1
Anti-anti-sigma factor, putative; See PMID:20190049 for expression data.
 
 
 0.983
gacS
Sensor histidine kinase/response regulator GacS.
  
 0.887
AAO55483.1
Hpt domain protein; See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF01627.
 
  
 0.790
ADD52990.1
Conserved protein of unknown function; PMID:20190049.
  
     0.759
AAO58683.1
Protein of unknown function; See PMID:20190049 for expression data; identified by Glimmer.
  
     0.754
AAO55481.1
STAS domain protein; See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF01740.
 
 
 0.734
flgJ
Peptidoglycan hydrolase FlgJ; See PMID:20190049 for expression data; similar to SP:P75942; identified by sequence similarity; putative.
   
    0.723
AAO54500.1
Protein of unknown function; See PMID:20190049 for expression data; identified by Glimmer.
  
     0.717
AAO53766.1
Conserved protein of unknown function; See PMID:20190049 for expression data; identified by Glimmer.
  
     0.712
AAO57844.1
Sensory box histidine kinase; Similar to GP:7271850; identified by sequence similarity; putative.
     0.712
Your Current Organism:
Pseudomonas syringae tomato
NCBI taxonomy Id: 223283
Other names: P. syringae pv. tomato str. DC3000, Pseudomonas syringae DC3000, Pseudomonas syringae pv. tomato DC3000, Pseudomonas syringae pv. tomato str. ATCC BAA-871, Pseudomonas syringae pv. tomato str. DC3000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.