Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AAO55656.1Cation ABC transporter, permease protein; See PMID:20190049 for expression data. (299 aa)    
Predicted Functional Partners:
AAO55657.1
Cation ABC transporter, ATP-binding protein; See PMID:20190049 for expression data.
 
 0.999
AAO55658.1
Cation ABC transporter, periplasmic cation-binding protein; See PMID:20190049 for expression data; similar to SP:P31304; identified by sequence similarity; putative; Belongs to the bacterial solute-binding protein 9 family.
 
 
 0.998
AAO55655.1
ABC transporter, periplasmic substrate-binding protein, putative; See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF01297.
 
  
 0.991
AAO55660.1
Conserved protein of unknown function; See PMID:20190049 for expression data; identified by Glimmer.
 
    0.980
znuC
Zinc ABC transporter, ATP-binding protein; Part of the ABC transporter complex ZnuABC involved in zinc import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Zinc importer (TC 3.A.1.15.5) family.
 
 0.978
znuA
Zinc ABC transporter, periplasmic zinc-binding protein; See PMID:20190049 for expression data.
 
 
 0.975
AAO55661.1
Conserved protein of unknown function; See PMID:20190049 for expression data; identified by Glimmer.
  
    0.965
AAO55659.1
Conserved protein of unknown function; See PMID:20190049 for expression data; identified by Glimmer.
  
    0.949
AAO55662.1
Iron-regulated membrane protein, putative; See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF03929.
 
    0.930
znuB
Zinc ABC transporter, permease protein.
  
  
 
0.921
Your Current Organism:
Pseudomonas syringae tomato
NCBI taxonomy Id: 223283
Other names: P. syringae pv. tomato str. DC3000, Pseudomonas syringae DC3000, Pseudomonas syringae pv. tomato DC3000, Pseudomonas syringae pv. tomato str. ATCC BAA-871, Pseudomonas syringae pv. tomato str. DC3000
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