Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
AAO55662.1Iron-regulated membrane protein, putative; See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF03929. (411 aa)    
Predicted Functional Partners:
AAO55660.1
Conserved protein of unknown function; See PMID:20190049 for expression data; identified by Glimmer.
 
    0.969
AAO55661.1
Conserved protein of unknown function; See PMID:20190049 for expression data; identified by Glimmer.
  
    0.967
AAO55655.1
ABC transporter, periplasmic substrate-binding protein, putative; See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF01297.
 
    0.964
AAO55659.1
Conserved protein of unknown function; See PMID:20190049 for expression data; identified by Glimmer.
  
    0.955
AAO55658.1
Cation ABC transporter, periplasmic cation-binding protein; See PMID:20190049 for expression data; similar to SP:P31304; identified by sequence similarity; putative; Belongs to the bacterial solute-binding protein 9 family.
 
    0.953
AAO55657.1
Cation ABC transporter, ATP-binding protein; See PMID:20190049 for expression data.
 
    0.931
AAO55656.1
Cation ABC transporter, permease protein; See PMID:20190049 for expression data.
 
    0.930
AAO57584.1
TonB-dependent siderophore receptor; Similar to GP:2981048; identified by sequence similarity; putative.
 
  
 0.805
AAO54808.1
TonB-dependent outer membrane heme receptor; See PMID:20190049 for expression data.
 
   
 0.707
AAO57161.1
TonB-dependent siderophore receptor; See PMID:20190049 for expression data; similar to SP:P25184; identified by sequence similarity; putative.
 
    0.706
Your Current Organism:
Pseudomonas syringae tomato
NCBI taxonomy Id: 223283
Other names: P. syringae pv. tomato str. DC3000, Pseudomonas syringae DC3000, Pseudomonas syringae pv. tomato DC3000, Pseudomonas syringae pv. tomato str. ATCC BAA-871, Pseudomonas syringae pv. tomato str. DC3000
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