Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AAO55669.1TonB-dependent siderophore receptor, putative; Similar to SP:P42512, GB:L17325, and PID:306323; identified by sequence similarity; putative; see PMID:20190049 for expression data; similar to SP:P42512, GB:L17325, and PID:306323, identified by sequence similarity, putative. (743 aa)    
Predicted Functional Partners:
AAO54735.1
Regulatory protein, putative; See PMID:20190049 for expression data.
 
 
 0.894
AAO55869.1
Conserved protein of unknown function; See PMID:20190049 for expression data; identified by Glimmer.
 
 
 0.796
AAO54731.1
Regulatory protein, putative; See PMID:20190049 for expression data.
 
 
 0.769
AAO54326.1
TonB-dependent siderophore receptor, putative.
  
  
 0.739
AAO53989.1
Regulatory protein, putative.
 
 
 0.736
AAO54809.1
Regulatory protein, putative.
 
 
 0.733
AAO57967.1
This gene is aparrently the terminal component of a non-ribosomal peptide synthetase (due to the presence of the terminal thioesterase domain) and is most likely associated with the previous gene which appears to be a initiating component. This gene contains three complete amino acid activation, thiolation and condensation domain modules and appears to be specific for glycine, an unidentified amino acid and serine according to the prediction algorithm at http://raynam.chm.jhu.edu/; nrps/index2.html. Taken together these two genes appear to direct the biosynthesis of a previously undesc [...]
  
  
 0.708
cmaA
Coronamic acid synthetase CmaA; Non-ribosomal peptide synthetase with adenylation and thiolation domains; reacts with the AMP derivative of L-allo-isoleucine to produce an aminoacyl thiolester intermediate during coronamic acid biosynthesis; see PMID: 14679222; see PMID:20190049 for expression data; non-ribosomal peptide synthetase with adenylation and thiolation domains, reacts with the AMP derivative of L-allo-isoleucine to produce an aminoacyl thiolester intermediate during coronamic acid biosynthesis, see PMID: 14679222.
  
  
 0.708
AAO54738.1
Membrane protein, putative; See PMID:20190049 for expression data; similar to GP:5757617; identified by sequence similarity; putative.
 
    0.703
AAO58658.1
Pyocin/colicin protein, putative; Similar to SP:Q06584; identified by sequence similarity; putative.
    
   0.691
Your Current Organism:
Pseudomonas syringae tomato
NCBI taxonomy Id: 223283
Other names: P. syringae pv. tomato str. DC3000, Pseudomonas syringae DC3000, Pseudomonas syringae pv. tomato DC3000, Pseudomonas syringae pv. tomato str. ATCC BAA-871, Pseudomonas syringae pv. tomato str. DC3000
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