Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
eda-24-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxyphosphogluconate; Similar to SP:P50846; identified by sequence similarity; putative. (211 aa)    
Predicted Functional Partners:
dgoK
2-dehydro-3-deoxygalactonate kinase; See PMID:20190049 for expression data; similar to SP:P31459; identified by sequence similarity; putative.
 
 
 0.997
AAO55696.1
Mandelate racemase/muconate lactonizing enzyme family protein; See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF02746.
 
   
 0.913
eda-1
4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxyphosphogluconate; See PMID:20190049 for expression data.
  
  
 
0.852
AAO55698.1
Transcriptional regulator, IclR family; See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF01614.
 
   
 0.805
AAO55697.1
MFS transporter, phthalate permease family; Similar to SP:P31457; identified by sequence similarity; putative.
 
   
 0.693
garD
D-galactarate dehydratase; See PMID:20190049 for expression data; similar to SP:P42240, and SP:P39829; identified by sequence similarity; putative.
 
  
 0.649
kdgK
2-dehydro-3-deoxygluconokinase; See PMID:20190049 for expression data; similar to SP:P37647, GB:Y00318, SP:P05156, PID:1335054, PID:1335055, PID:1335056, and PID:182607; identified by sequence similarity; putative.
 
  
 0.636
AAO56726.1
Mandelate racemase/muconate lactonizing enzyme family protein; Similar to GP:15160264; identified by sequence similarity; putative; Belongs to the mandelate racemase/muconate lactonizing enzyme family.
 
   
 0.609
edd
6-phosphogluconate dehydratase; Catalyzes the dehydration of 6-phospho-D-gluconate to 2- dehydro-3-deoxy-6-phospho-D-gluconate; Belongs to the IlvD/Edd family.
 
  
 0.484
asd-1
Aspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family.
       0.464
Your Current Organism:
Pseudomonas syringae tomato
NCBI taxonomy Id: 223283
Other names: P. syringae pv. tomato str. DC3000, Pseudomonas syringae DC3000, Pseudomonas syringae pv. tomato DC3000, Pseudomonas syringae pv. tomato str. ATCC BAA-871, Pseudomonas syringae pv. tomato str. DC3000
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