Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
AAO55707.1Conserved protein of unknown function; See PMID:20190049 for expression data; similar to GP:9948985; identified by sequence similarity; putative. (244 aa)    
Predicted Functional Partners:
AAO55708.1
Conserved protein of unknown function; See PMID:20190049 for expression data; similar to SP:P58040; identified by sequence similarity; putative.
       0.769
AAO55709.1
Conserved protein of unknown function; See PMID:20190049 for expression data; similar to GP:11559420; identified by sequence similarity; putative.
       0.716
AAO55706.1
Transcriptional regulator, GntR family; See PMID:20190049 for expression data; identified by match to TIGR protein family HMM TIGR01265.
       0.685
AAO58479.1
Ham1 protein; Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions. Belongs to the HAM1 NTPase family.
   
   0.598
AAO55704.1
Lipoprotein, putative; See PMID:20190049 for expression data.
       0.512
nhaA-1
Sodium-proton antiporter NhaA; Na(+)/H(+) antiporter that extrudes sodium in exchange for external protons; Belongs to the NhaA Na(+)/H(+) (TC 2.A.33) antiporter family.
   
    0.505
nhaA-2
Sodium-proton antiporter NhaA; Na(+)/H(+) antiporter that extrudes sodium in exchange for external protons; Belongs to the NhaA Na(+)/H(+) (TC 2.A.33) antiporter family.
   
    0.505
AAO55703.1
Conserved hypothetical protein; Similar to GP:5257108; identified by sequence similarity; putative.
       0.493
AAO55705.1
ompA family protein; See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF00691.
       0.426
Your Current Organism:
Pseudomonas syringae tomato
NCBI taxonomy Id: 223283
Other names: P. syringae pv. tomato str. DC3000, Pseudomonas syringae DC3000, Pseudomonas syringae pv. tomato DC3000, Pseudomonas syringae pv. tomato str. ATCC BAA-871, Pseudomonas syringae pv. tomato str. DC3000
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