Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AAO55765.1Conserved protein of unknown function; See PMID:20190049 for expression data; similar to SP:P11430, SP:P16529, GB:S51490, GB:D00217, and PID:262707; identified by sequence similarity; putative. (327 aa)    
Predicted Functional Partners:
AAO55766.1
Transglutaminase-like domain protein; Similar to SP:P11430, SP:P16529, GB:S51490, GB:D00217, and PID:262707; identified by sequence similarity; putative.
  
 0.988
AAO55764.1
moxR protein, putative; See PMID:20190049 for expression data; similar to GB:J03544, SP:P11216, and PID:307200; identified by sequence similarity; putative.
 
  
 0.981
AAO55767.1
Conserved protein of unknown function; See PMID:20190049 for expression data; identified by Glimmer.
  
  
 0.907
pilP
Type IV pilus biogenesis protein PilP; See PMID:20190049 for expression data; similar to GB:M86917, SP:P22059, and PID:189403; identified by sequence similarity; putative.
 
     0.753
pilN
Type IV pilus biogenesis protein PilN; See PMID:20190049 for expression data.
 
     0.752
pilZ
Type IV pilus biogenesis protein PilZ; See PMID:20190049 for expression data.
 
     0.737
pilO
Type IV pilus biogenesis protein PilO; See PMID:20190049 for expression data; similar to GB:Z11899, GB:Z11898, GB:Z11900, GB:Z21964, GB:Z21963, SP:P31359, SP:Q01860, and PID:35169; identified by sequence similarity; putative.
 
     0.735
AAO53730.1
LysM domain protein; Similar to GB:L21196, and PID:347174; identified by sequence similarity; putative; see PMID:20190049 for expression data; similar to GB:L21196, and PID:347174, identified by sequence similarity, putative.
 
     0.733
pilM
Type IV pilus biogenesis protein PilM; See PMID:20190049 for expression data.
  
     0.722
AAO55763.1
Lipoprotein, putative; See PMID:20190049 for expression data.
       0.703
Your Current Organism:
Pseudomonas syringae tomato
NCBI taxonomy Id: 223283
Other names: P. syringae pv. tomato str. DC3000, Pseudomonas syringae DC3000, Pseudomonas syringae pv. tomato DC3000, Pseudomonas syringae pv. tomato str. ATCC BAA-871, Pseudomonas syringae pv. tomato str. DC3000
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