STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AAO55934.1Monooxygenase, NtaA/SnaA/SoxA family; Similar to GP:15159933, and SP:P54950; identified by sequence similarity; putative. (448 aa)    
Predicted Functional Partners:
AAO55933.1
D-isomer specific 2-hydroxyacid dehydrogenase family protein; Identified by match to PFAM protein family HMM PF02826.
 
     0.800
ssuE
FMN reductase, NADH-dependent; Similar to SP:O85762, and SP:O85762; identified by sequence similarity; putative.
 
 
 0.737
ssuD
Alkanesulfonate monooxygenase; Catalyzes the desulfonation of aliphatic sulfonates. Belongs to the SsuD family.
  
     0.732
AAO55932.1
ABC transporter, periplasmic substrate-binding protein, aliphatic sulfonates family; Similar to SP:P75853; identified by sequence similarity; putative.
 
  
 0.715
AAO57967.1
This gene is aparrently the terminal component of a non-ribosomal peptide synthetase (due to the presence of the terminal thioesterase domain) and is most likely associated with the previous gene which appears to be a initiating component. This gene contains three complete amino acid activation, thiolation and condensation domain modules and appears to be specific for glycine, an unidentified amino acid and serine according to the prediction algorithm at http://raynam.chm.jhu.edu/; nrps/index2.html. Taken together these two genes appear to direct the biosynthesis of a previously undesc [...]
   
 
 0.700
cmaA
Coronamic acid synthetase CmaA; Non-ribosomal peptide synthetase with adenylation and thiolation domains; reacts with the AMP derivative of L-allo-isoleucine to produce an aminoacyl thiolester intermediate during coronamic acid biosynthesis; see PMID: 14679222; see PMID:20190049 for expression data; non-ribosomal peptide synthetase with adenylation and thiolation domains, reacts with the AMP derivative of L-allo-isoleucine to produce an aminoacyl thiolester intermediate during coronamic acid biosynthesis, see PMID: 14679222.
   
 
 0.700
AAO56484.1
acyl-CoA dehydrogenase family protein; Similar to GP:15163550; identified by sequence similarity; putative.
 
    0.591
AAO58610.1
acyl-CoA dehydrogenase family protein; See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF02770.
 
    0.586
AAO55949.1
acyl-CoA dehydrogenase family protein; See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF02771.
 
    0.581
AAO55948.1
acyl-CoA dehydrogenase family protein; See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF02770.
 
    0.579
Your Current Organism:
Pseudomonas syringae tomato
NCBI taxonomy Id: 223283
Other names: P. syringae pv. tomato str. DC3000, Pseudomonas syringae DC3000, Pseudomonas syringae pv. tomato DC3000, Pseudomonas syringae pv. tomato str. ATCC BAA-871, Pseudomonas syringae pv. tomato str. DC3000
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.