Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AAO56032.1Transcriptional regulator, IclR family; See PMID:20190049 for expression data; similar to GP:14027848; identified by sequence similarity; putative. (279 aa)    
Predicted Functional Partners:
AAO56028.1
Conserved hypothetical protein; Similar to SP:O87386; identified by sequence similarity; putative.
 
     0.915
AAO56025.1
Bacterial extracellular solute-binding domain protein; Similar to GP:15162210, and GP:8918683; identified by sequence similarity; putative.
 
     0.864
AAO56026.1
Oxidoreductase, FAD-binding protein; Similar to GP:2665709; identified by sequence similarity; putative.
 
    0.859
AAO58802.1
Allophanate hydrolase, putative; Similar to GP:2290992; identified by sequence similarity; putative.
  
    0.840
AAO56029.1
ABC transporter, permease protein.
 
     0.786
AAO56030.1
ABC transporter, permease protein.
 
     0.774
AAO56027.1
Pyridine nucleotide-disulfide oxidoreductase family protein; Similar to GP:14026612, and SP:P72300; identified by sequence similarity; putative.
 
     0.773
AAO57027.1
Transcriptional regulator, IclR family.
  
     0.758
pcaR
Pca regulon regulatory protein PcaR; See PMID:20190049 for expression data; similar to GP:6646870, and SP:Q52154; identified by sequence similarity; putative.
  
     0.725
AAO53799.1
Conserved hypothetical protein; Identified by Glimmer2; putative.
  
     0.690
Your Current Organism:
Pseudomonas syringae tomato
NCBI taxonomy Id: 223283
Other names: P. syringae pv. tomato str. DC3000, Pseudomonas syringae DC3000, Pseudomonas syringae pv. tomato DC3000, Pseudomonas syringae pv. tomato str. ATCC BAA-871, Pseudomonas syringae pv. tomato str. DC3000
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