Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AAO56304.1Transcriptional regulator, LysR family; Similar to GP:15158811; identified by sequence similarity; putative; Belongs to the LysR transcriptional regulatory family. (301 aa)    
Predicted Functional Partners:
AAO56303.1
Transcriptional regulator, LysR family; Identified by match to PFAM protein family HMM PF00126; Belongs to the LysR transcriptional regulatory family.
 
    
0.778
AAO56570.1
Transcriptional regulator, LysR family; Similar to GP:15161940; identified by sequence similarity; putative; Belongs to the LysR transcriptional regulatory family.
  
     0.750
AAO57147.1
Transcriptional regulator, LysR family; Similar to GP:15073695; identified by sequence similarity; putative; Belongs to the LysR transcriptional regulatory family.
  
     0.748
AAO55290.1
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.728
AAO56082.1
Transcriptional regulator, LysR family; Identified by match to PFAM protein family HMM PF00126; Belongs to the LysR transcriptional regulatory family.
  
     0.725
AAO55956.1
Transcriptional regulator, LysR family; Identified by match to PFAM protein family HMM PF02954; Belongs to the LysR transcriptional regulatory family.
  
     0.699
AAO54297.1
Transcriptional regulator, LysR family; Identified by match to PFAM protein family HMM PF00126; Belongs to the LysR transcriptional regulatory family.
  
     0.694
AAO56430.1
Transcriptional regulator, LysR family; Identified by match to PFAM protein family HMM PF01047; Belongs to the LysR transcriptional regulatory family.
  
     0.693
AAO55397.1
Transcriptional regulator, LysR family; See PMID:20190049 for expression data; similar to GP:13937519; identified by sequence similarity; putative; Belongs to the LysR transcriptional regulatory family.
  
     0.691
AAO56308.1
Transcriptional regulator, LysR family; Similar to GP:15140147; identified by sequence similarity; putative; Belongs to the LysR transcriptional regulatory family.
  
     0.686
Your Current Organism:
Pseudomonas syringae tomato
NCBI taxonomy Id: 223283
Other names: P. syringae pv. tomato str. DC3000, Pseudomonas syringae DC3000, Pseudomonas syringae pv. tomato DC3000, Pseudomonas syringae pv. tomato str. ATCC BAA-871, Pseudomonas syringae pv. tomato str. DC3000
Server load: low (8%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.