Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AAO56311.1Peptide ABC transporter, permease protein. (306 aa)    
Predicted Functional Partners:
AAO56312.1
Peptide ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
 0.998
AAO56310.1
Peptide ABC transporter, permease protein.
 
 0.997
AAO56313.1
Peptide ABC transporter, periplasmic peptide-binding protein; Similar to GP:15140494, and SP:P23847; identified by sequence similarity; putative.
 
 0.986
AAO56078.1
Peptide ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 0.954
AAO57984.1
Peptide ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 0.947
AAO58012.1
Dipeptide ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 0.947
AAO56730.1
Dipeptide ABC transporter, ATP-binding protein.
 
 0.945
AAO57983.1
Peptide ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 0.934
AAO56077.1
Peptide ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 0.933
AAO56080.1
Peptide ABC transporter, permease protein.
 
 
 0.893
Your Current Organism:
Pseudomonas syringae tomato
NCBI taxonomy Id: 223283
Other names: P. syringae pv. tomato str. DC3000, Pseudomonas syringae DC3000, Pseudomonas syringae pv. tomato DC3000, Pseudomonas syringae pv. tomato str. ATCC BAA-871, Pseudomonas syringae pv. tomato str. DC3000
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