Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
AAO56487.1Ribose ABC transporter, ATP-binding protein, putative; Similar to GP:6714793, and SP:P36947; identified by sequence similarity; putative. (522 aa)    
Predicted Functional Partners:
AAO56485.1
Ribose ABC transporter, permease protein, putative; Similar to GP:15140938, and SP:P37772; identified by sequence similarity; putative; Belongs to the binding-protein-dependent transport system permease family.
 
 0.997
AAO56486.1
Ribose ABC transporter, permease protein, putative; Similar to SP:P04984; identified by sequence similarity; putative; Belongs to the binding-protein-dependent transport system permease family.
 
 0.997
AAO56488.1
Ribose ABC transporter, periplasmic ribose-binding protein, putative; Similar to SP:P02925; identified by sequence similarity; putative.
 
 0.994
rbsC-1
Ribose ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.980
rbsC-2
Ribose ABC transporter, permease protein; Similar to GP:6714794, and SP:P36948; identified by sequence similarity; putative; Belongs to the binding-protein-dependent transport system permease family.
 0.971
rbsB-2
Ribose ABC transporter, periplasmic ribose-binding protein; Similar to GP:6714794, and SP:P36949; identified by sequence similarity; putative.
 
 0.961
rbsB-1
Ribose ABC transporter, periplasmic ribose-binding protein; See PMID:20190049 for expression data.
 
 0.959
rbsA-2
Ribose ABC transporter, ATP-binding protein.
  
  
 
0.916
rbsA-1
Ribose ABC transporter, ATP-binding protein.
  
  
 
0.915
araH
L-arabinose ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.861
Your Current Organism:
Pseudomonas syringae tomato
NCBI taxonomy Id: 223283
Other names: P. syringae pv. tomato str. DC3000, Pseudomonas syringae DC3000, Pseudomonas syringae pv. tomato DC3000, Pseudomonas syringae pv. tomato str. ATCC BAA-871, Pseudomonas syringae pv. tomato str. DC3000
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