Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AAO56534.1ISPsy12, transposase OrfA; Identified by match to PFAM protein family HMM PF01527. (62 aa)    
Predicted Functional Partners:
AAO56533.1
ISPsy12, transposase OrfB; Similar to GP:9946886, and GP:9946886; identified by sequence similarity; putative.
 
  
 0.951
AAO58139.1
ISPsy13, transposase OrfB.
  
  
 0.774
AAO56532.1
5'-nucleotidase, putative; Similar to GP:12659324; identified by sequence similarity; putative.
       0.757
AAO56437.1
P-hydroxycinnamoyl CoA hydratase/lyase; See PMID:20190049 for expression data; Belongs to the enoyl-CoA hydratase/isomerase family.
  
     0.460
fimA
Type I pilus biogensis protein FimA.
  
     0.459
AAO56535.1
Sigma-54 dependent transcriptional regulator; Similar to GB:X62744, GB:X76775, GB:U04877, GB:U04878, GB:Z24753, SP:P28067, PID:512469, and PID:512470; identified by sequence similarity; putative.
       0.455
AAO56317.1
Fatty acid desaturase; Identified by match to PFAM protein family HMM PF01569.
  
     0.450
AAO55743.1
Fimbrial protein, putative.
  
     0.447
AAO53917.1
Rhs family protein; Similar to GP:15130940, and SP:P16919; identified by sequence similarity; putative.
  
     0.424
AAO57538.1
Rhs family protein; See PMID:20190049 for expression data; similar to GP:15130940, and SP:P16919; identified by sequence similarity; putative.
  
     0.417
Your Current Organism:
Pseudomonas syringae tomato
NCBI taxonomy Id: 223283
Other names: P. syringae pv. tomato str. DC3000, Pseudomonas syringae DC3000, Pseudomonas syringae pv. tomato DC3000, Pseudomonas syringae pv. tomato str. ATCC BAA-871, Pseudomonas syringae pv. tomato str. DC3000
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.