Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AAO56616.1Conserved protein of unknown function; See PMID:20190049 for expression data; identified by Glimmer. (137 aa)    
Predicted Functional Partners:
AAO56613.1
Alpha-amylase family protein.
     
 0.784
malQ
4-alpha-glucanotransferase.
     
 0.784
AAO56615.1
Glycosyl hydrolase, family 13; See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF00128.
     
 0.784
glgX
Glycogen operon protein GlgX; See PMID:20190049 for expression data; Belongs to the glycosyl hydrolase 13 family.
     
 0.754
glgA
Glycogen synthase; Synthesizes alpha-1,4-glucan chains using ADP-glucose.
     
 0.703
AAO56618.1
Conserved hypothetical protein; Similar to GP:21112732, GB:X80061, and PID:510823; identified by sequence similarity; putative.
       0.579
AAO56620.1
Methyltransferase, putative; Similar to SP:P26026; identified by sequence similarity; putative.
       0.524
AAO56619.1
Conserved domain protein; Identified by match to PFAM protein family HMM PF02585.
       0.523
AAO56621.1
Glycosyl transferase, group 2 family protein; Similar to GB:M66160, SP:P26977, and PID:154288; identified by sequence similarity; putative.
       0.483
Your Current Organism:
Pseudomonas syringae tomato
NCBI taxonomy Id: 223283
Other names: P. syringae pv. tomato str. DC3000, Pseudomonas syringae DC3000, Pseudomonas syringae pv. tomato DC3000, Pseudomonas syringae pv. tomato str. ATCC BAA-871, Pseudomonas syringae pv. tomato str. DC3000
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