Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AAO56634.1Conserved hypothetical protein; Similar to GP:6117893; identified by sequence similarity; putative. (203 aa)    
Predicted Functional Partners:
AAO56635.1
Magnesium chelatase, subunit ChII, putative; See PMID:20190049 for expression data.
 
 
 0.989
AAO56636.1
cobN/magnesium chelatase family protein.
 
 
 0.965
AAO56637.1
Cobalamin synthesis protein/P47K family protein; See PMID:20190049 for expression data.
 
    0.838
AAO56210.1
Tetrapyrrole methylase family protein; See PMID:20190049 for expression data; similar to GP:15075950; identified by sequence similarity; putative.
 
     0.705
cobL
precorrin-6Y C5,15-methyltransferase (decarboxylating); See PMID:20190049 for expression data.
 
     0.560
cobH
precorrin-8X methylmutase; See PMID:20190049 for expression data.
 
   
 0.493
AAO58309.1
Precorrin-6x reductase, putative.
 
    0.481
AAO58303.1
CbiG protein/precorrin-3B C17-methyltransferase; See PMID:20190049 for expression data.
 
   
 0.470
cobI
Precorrin-2 C20-methyltransferase; Methylates precorrin-2 at the C-20 position to produce precorrin-3A.
 
     0.451
cobB
Cobyrinic acid a,c-diamide synthase family protein; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of hydrogenobyrinate, using either L- glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family.
 
   
 0.401
Your Current Organism:
Pseudomonas syringae tomato
NCBI taxonomy Id: 223283
Other names: P. syringae pv. tomato str. DC3000, Pseudomonas syringae DC3000, Pseudomonas syringae pv. tomato DC3000, Pseudomonas syringae pv. tomato str. ATCC BAA-871, Pseudomonas syringae pv. tomato str. DC3000
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