Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
tolR-1tolR protein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity. (148 aa)    
Predicted Functional Partners:
tolQ-1
tolQ protein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
 
 
 0.993
tolQ-2
tolQ protein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
 
 
 0.955
AAO56717.1
tonB protein, putative; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family.
  
 
 0.937
AAO53816.1
Biopolymer transport protein ExbB, putative; Similar to SP:O34260, and SP:P18783; identified by sequence similarity; putative.
 
 
 0.883
exbB-2
TonB system transport protein ExbB; Similar to GP:3916254; identified by sequence similarity; putative.
 
 
 0.880
exbB-3
TonB system transport protein ExbB.
 
 
 0.880
exbB-1
TonB system transport protein ExbB; Similar to GP:14595284; identified by sequence similarity; putative; see PMID:20190049 for expression data; similar to GP:14595284, identified by sequence similarity, putative.
 
 
 0.853
pal
Peptidoglycan-associated lipoprotein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
 
 
 0.818
AAO56720.1
Phytase domain protein; Similar to SP:O66037; identified by sequence similarity; putative.
       0.804
AAO54554.1
MotA/TolQ/ExbB proton channel family protein; Identified by match to PFAM protein family HMM PF01618.
 
 
 0.802
Your Current Organism:
Pseudomonas syringae tomato
NCBI taxonomy Id: 223283
Other names: P. syringae pv. tomato str. DC3000, Pseudomonas syringae DC3000, Pseudomonas syringae pv. tomato DC3000, Pseudomonas syringae pv. tomato str. ATCC BAA-871, Pseudomonas syringae pv. tomato str. DC3000
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