Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-expression
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[Homology]
Score
AAO56728.1Dipeptide ABC transporter, permease protein DppB, putative. (345 aa)    
Predicted Functional Partners:
AAO56729.1
Dipeptide ABC transporter, permease protein DppC, putative.
 
 0.997
AAO56727.1
Dipeptide ABC transporter, periplasmic dipeptide-binding protein, putative.
 
 0.994
AAO56730.1
Dipeptide ABC transporter, ATP-binding protein.
 
 0.994
AAO56731.1
Dipeptide ABC transporter, ATP-binding protein.
 
 
 0.991
AAO57985.1
Peptide ABC transporter, permease protein.
 
 
 0.895
AAO53797.1
Peptide ABC transporter, permease protein.
 
 
 0.893
AAO56079.1
Peptide ABC transporter, permease protein.
 
 
 0.892
AAO56579.1
Nickel ABC transporter, permease protein, putative.
 
 
 0.892
dppC
Dipeptide ABC transporter, permease protein.
 
 
 0.892
AAO56311.1
Peptide ABC transporter, permease protein.
 
 
 0.889
Your Current Organism:
Pseudomonas syringae tomato
NCBI taxonomy Id: 223283
Other names: P. syringae pv. tomato str. DC3000, Pseudomonas syringae DC3000, Pseudomonas syringae pv. tomato DC3000, Pseudomonas syringae pv. tomato str. ATCC BAA-871, Pseudomonas syringae pv. tomato str. DC3000
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