STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nirDNitrite reductase [NAD(P)H], small subunit. (128 aa)    
Predicted Functional Partners:
nirB
Nitrite reductase [NAD(P)H], large subunit; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
 
 0.999
AAO55816.1
Assimilatory nitrate reductase electron transfer subunit domain protein; Similar to GP:15159393, and SP:P42435; identified by sequence similarity; putative.
 
 0.973
nasA
Nitrate reductase; Similar to GP:15159397, and SP:Q06457; identified by sequence similarity; putative; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.
 
  
 0.946
AAO55818.1
Nitrate transporter.
  
 
 0.931
AAO58735.1
Glutamine synthetase; See PMID:20190049 for expression data; Belongs to the glutamine synthetase family.
     
 0.909
AAO55439.1
Glutamine synthetase; Identified by match to TIGR protein family HMM TIGR00653; Belongs to the glutamine synthetase family.
     
 0.907
glnA-1
Glutamine synthetase, type I; Identified by match to TIGR protein family HMM TIGR01692; see PMID:20190049 for expression data; identified by match to TIGR protein family HMM TIGR01692.
     
 0.905
AAO58736.1
Glutamine synthetase; See PMID:20190049 for expression data; Belongs to the glutamine synthetase family.
     
 0.905
AAO53742.1
Nitrilase, putative; Similar to GP:15143035, and SP:Q03217; identified by sequence similarity; putative.
   
 
  0.901
amiE
Aliphatic amidase; Is an aliphatic amidase with a restricted substrate specificity, as it only hydrolyzes formamide; Belongs to the carbon-nitrogen hydrolase superfamily. Aliphatic amidase family.
   
 
  0.901
Your Current Organism:
Pseudomonas syringae tomato
NCBI taxonomy Id: 223283
Other names: P. syringae pv. tomato str. DC3000, Pseudomonas syringae DC3000, Pseudomonas syringae pv. tomato DC3000, Pseudomonas syringae pv. tomato str. ATCC BAA-871, Pseudomonas syringae pv. tomato str. DC3000
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.