Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AAO56774.1Transporter, putative; See PMID:20190049 for expression data; similar to GB:X04143, SP:P02818, and PID:29450; identified by sequence similarity; putative. (311 aa)    
Predicted Functional Partners:
AAO54798.1
Membrane protein, putative; See PMID:20190049 for expression data.
      
 0.629
AAO56775.1
DNA-binding heavy metal response regulator, putative; See PMID:20190049 for expression data.
     
 0.581
AAO56776.1
Sensor histidine kinase.
       0.563
AAO54528.1
Carbonic anhydrase; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family.
  
    0.553
AAO54862.1
Carbonic anhydrase; Identified by match to TIGR protein family HMM TIGR01409; see PMID:20190049 for expression data; identified by match to TIGR protein family HMM TIGR01409.
  
    0.553
cynT
Carbonic anhydrase; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family.
  
    0.553
cysG
Siroheme synthase; Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD-dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme.
     
 0.548
AAO58332.1
Osmotically-inducible lipoprotein OsmE, putative; See PMID:20190049 for expression data.
  
   
 0.527
AAO57002.1
Conserved protein of unknown function; Probably phosphorylates lipids; the in vivo substrate is unknown.
 
  
 0.525
pncA
Pyrazinamidase/nicotinamidase; See PMID:20190049 for expression data; similar to SP:P21369; identified by sequence similarity; putative.
       0.497
Your Current Organism:
Pseudomonas syringae tomato
NCBI taxonomy Id: 223283
Other names: P. syringae pv. tomato str. DC3000, Pseudomonas syringae DC3000, Pseudomonas syringae pv. tomato DC3000, Pseudomonas syringae pv. tomato str. ATCC BAA-871, Pseudomonas syringae pv. tomato str. DC3000
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