STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AAO56811.1Membrane protein, putative; See PMID:20190049 for expression data; similar to SP:P06967; identified by sequence similarity; putative; Belongs to the BI1 family. (223 aa)    
Predicted Functional Partners:
AAO58936.1
Conserved protein of unknown function; See PMID:20190049 for expression data; identified by Glimmer.
   
  
 0.725
htpX
Heat shock protein HtpX; See PMID:20190049 for expression data; Belongs to the peptidase M48B family.
  
  
 0.641
AAO56819.1
Conserved hypothetical protein; Part of a sulfur-relay system.
     
 0.599
AAO56817.1
DsrF family protein; See PMID:20190049 for expression data; similar to SP:Q9I0N2, and SP:Q9I0N2; identified by sequence similarity; putative; Belongs to the DsrF/TusC family.
  
    0.549
AAO56816.1
DsrE family protein; See PMID:20190049 for expression data.
       0.533
AAO56818.1
DsrH family protein; See PMID:20190049 for expression data; similar to GP:3228384; identified by sequence similarity; putative.
       0.533
AAO56820.1
Glycosyl transferase, putative; See PMID:20190049 for expression data.
       0.533
AAO56821.1
Glutathione S-transferase domain protein.
       0.533
polI
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
       0.524
metH
5-methyltetrahydrofolate--homocysteine methyltransferase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
       0.518
Your Current Organism:
Pseudomonas syringae tomato
NCBI taxonomy Id: 223283
Other names: P. syringae pv. tomato str. DC3000, Pseudomonas syringae DC3000, Pseudomonas syringae pv. tomato DC3000, Pseudomonas syringae pv. tomato str. ATCC BAA-871, Pseudomonas syringae pv. tomato str. DC3000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.