Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AAO56923.1Glycosyl transferase, group 1 family protein; Similar to GP:15160113; identified by sequence similarity; putative. (409 aa)    
Predicted Functional Partners:
AAO56924.1
Capsular polysaccharide biosynthesis protein; Similar to SP:Q48460; identified by sequence similarity; putative.
 
  
 0.954
AAO56922.1
Glycosyl transferase, group 1 family protein.
 
    
0.847
AAO56921.1
Glycosyl transferase, group 1 family protein.
 
     0.721
AAO56920.1
Glycosyl transferase, group 2 family protein; Identified by match to TIGR protein family HMM TIGR01556.
 
  
 0.687
AAO56925.1
Capsular polysaccharide biosynthesis protein; Similar to GP:4512005, and SP:Q46629; identified by sequence similarity; putative.
  
  
 0.666
AAO57004.1
Capsular polysaccharide biosynthesis protein PslA; See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF02719.
 
  
 0.646
AAO57011.1
Glycosyl transferase, group 1 family protein PslI; See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF00534.
  
     0.614
AAO56915.1
Polysaccharide biosynthesis protein, putative; Identified by match to PFAM protein family HMM PF03023.
  
  
 0.556
glgB
1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
   
 0.522
AAO56613.1
Alpha-amylase family protein.
   
 0.522
Your Current Organism:
Pseudomonas syringae tomato
NCBI taxonomy Id: 223283
Other names: P. syringae pv. tomato str. DC3000, Pseudomonas syringae DC3000, Pseudomonas syringae pv. tomato DC3000, Pseudomonas syringae pv. tomato str. ATCC BAA-871, Pseudomonas syringae pv. tomato str. DC3000
Server load: low (6%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.