Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AAO56997.1Soluble lytic murein transglycosylase, putative; See PMID:20190049 for expression data; similar to SP:P03810; identified by sequence similarity; putative. (642 aa)    
Predicted Functional Partners:
AAO56996.1
ABC transporter, ATP-binding protein; See PMID:20190049 for expression data; similar to SP:P43672; identified by sequence similarity; putative.
     
 0.752
AAO58767.1
Conserved protein of unknown function; See PMID:20190049 for expression data; identified by Glimmer.
  
  
 0.750
mltG
Conserved protein of unknown function; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation.
  
  
 0.683
lptD
Organic solvent tolerance protein, putative; Together with LptE, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane.
  
  
 0.619
AAO57413.1
Lipoprotein, putative; See PMID:20190049 for expression data.
  
     0.556
algK
Alginate biosynthesis protein AlgK; May be involved in the polymerization of mannuronate to alginate.
  
  
 0.536
dacB
D-alanyl-D-alanine carboxypeptidase.
  
  
 0.535
AAO58417.1
Conserved hypothetical protein; Identified by match to PFAM protein family HMM PF02585.
  
     0.525
ftsQ
Cell division protein FtsQ, putative; Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly.
  
   
 0.492
AAO57325.1
Conserved protein of unknown function; See PMID:20190049 for expression data; identified by Glimmer.
  
     0.475
Your Current Organism:
Pseudomonas syringae tomato
NCBI taxonomy Id: 223283
Other names: P. syringae pv. tomato str. DC3000, Pseudomonas syringae DC3000, Pseudomonas syringae pv. tomato DC3000, Pseudomonas syringae pv. tomato str. ATCC BAA-871, Pseudomonas syringae pv. tomato str. DC3000
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