STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AAO57004.1Capsular polysaccharide biosynthesis protein PslA; See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF02719. (478 aa)    
Predicted Functional Partners:
AAO57005.1
Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase PslB; See PMID:20190049 for expression data; similar to GP:3510759; identified by sequence similarity; putative; Belongs to the mannose-6-phosphate isomerase type 2 family.
  
  
 0.951
AAO56918.1
Tyrosine-protein kinase; Similar to GP:4512007, and SP:P38134; identified by sequence similarity; putative.
 
  
 0.842
AAO54755.1
Hypothetical protein; Similar to GB:X63522, GB:M84820, GB:X65463, GB:X66424, GB:Z65589, SP:P28702, and PID:35311; identified by sequence similarity; putative.
  
  
 0.793
algA
Alginate biosynthesis protein AlgA; Produces a precursor for alginate polymerization. The alginate layer provides a protective barrier against host immune defenses and antibiotics (By similarity).
  
  
 0.793
AAO57009.1
Glycosyl hydrolase, family 5 PslG; See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF00150; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
 
  
 0.787
AAO57007.1
Exopolysaccharide biosythesis protein PslE; See PMID:20190049 for expression data.
 
  
 0.779
AAO57006.1
Lipoprotein PslD; See PMID:20190049 for expression data.
  
  
 0.767
AAO57012.1
Membrane protein PslJ; See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF04123.
 
  
 0.750
AAO57011.1
Glycosyl transferase, group 1 family protein PslI; See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF00534.
 
  
 0.749
AAO57013.1
Bacterial transferase, hexapeptide repeat protein; See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF00132.
 
  
 0.745
Your Current Organism:
Pseudomonas syringae tomato
NCBI taxonomy Id: 223283
Other names: P. syringae pv. tomato str. DC3000, Pseudomonas syringae DC3000, Pseudomonas syringae pv. tomato DC3000, Pseudomonas syringae pv. tomato str. ATCC BAA-871, Pseudomonas syringae pv. tomato str. DC3000
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