Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
AAO57005.1Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase PslB; See PMID:20190049 for expression data; similar to GP:3510759; identified by sequence similarity; putative; Belongs to the mannose-6-phosphate isomerase type 2 family. (485 aa)    
Predicted Functional Partners:
AAO56924.1
Capsular polysaccharide biosynthesis protein; Similar to SP:Q48460; identified by sequence similarity; putative.
  
  
 0.986
gmd
GDP-mannose 4,6-dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose.
 
 
 0.980
algC
Phosphomannomutase AlgC; The phosphomannomutase activity produces a precursor for alginate polymerization. The alginate layer causes a mucoid phenotype and provides a protective barrier against host immune defenses and antibiotics. Also involved in core-LPS biosynthesis due to its phosphoglucomutase activity. Essential for biofilm production (By similarity).
 
 0.971
algD
GDP-mannose 6-dehydrogenase AlgD; Catalyzes the oxidation of guanosine diphospho-D-mannose (GDP-D-mannose) to GDP-D-mannuronic acid, a precursor for alginate polymerization. The alginate layer causes a mucoid phenotype and provides a protective barrier against host immune defenses and antibiotics (By similarity); Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.
 
 
 0.954
pgi
Glucose-6-phosphate isomerase; Identified by match to PFAM protein family HMM PF00342; see PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF00342.
  
 
 0.942
AAO57004.1
Capsular polysaccharide biosynthesis protein PslA; See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF02719.
  
  
 0.933
fbp
Fructose-1,6-bisphosphatase; Similar to SP:P19911; identified by sequence similarity; putative; see PMID:20190049 for expression data; similar to SP:P19911, identified by sequence similarity, putative.
   
 0.922
algA
Alginate biosynthesis protein AlgA; Produces a precursor for alginate polymerization. The alginate layer provides a protective barrier against host immune defenses and antibiotics (By similarity).
 
  
 
0.921
glmS
Glucosamine--fructose-6-phosphate aminotransferase, isomerizing; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.
    
 0.919
AAO56203.1
Fructokinase; Similar to GP:2293420; identified by sequence similarity; putative; see PMID:20190049 for expression data; similar to GP:2293420, identified by sequence similarity, putative.
    
 0.915
Your Current Organism:
Pseudomonas syringae tomato
NCBI taxonomy Id: 223283
Other names: P. syringae pv. tomato str. DC3000, Pseudomonas syringae DC3000, Pseudomonas syringae pv. tomato DC3000, Pseudomonas syringae pv. tomato str. ATCC BAA-871, Pseudomonas syringae pv. tomato str. DC3000
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