Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AAO57006.1Lipoprotein PslD; See PMID:20190049 for expression data. (258 aa)    
Predicted Functional Partners:
AAO57007.1
Exopolysaccharide biosythesis protein PslE; See PMID:20190049 for expression data.
 
 
 0.999
AAO57008.1
Glycosyl transferase, group 1 family protein PslF; See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF00534.
 
  
 0.988
AAO57010.1
Glycosyl transferase, group 1 family protein PslH; See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF00534.
  
  
 0.982
AAO57012.1
Membrane protein PslJ; See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF04123.
 
  
 0.979
AAO56918.1
Tyrosine-protein kinase; Similar to GP:4512007, and SP:P38134; identified by sequence similarity; putative.
 
 
 0.968
AAO57011.1
Glycosyl transferase, group 1 family protein PslI; See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF00534.
  
  
 0.944
AAO56924.1
Capsular polysaccharide biosynthesis protein; Similar to SP:Q48460; identified by sequence similarity; putative.
  
  
 0.940
AAO57013.1
Bacterial transferase, hexapeptide repeat protein; See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF00132.
 
    0.917
AAO55865.1
Glycosyl transferase, group 2 family protein; See PMID:20190049 for expression data; similar to GP:3132264; identified by sequence similarity; putative.
  
  
 0.887
AAO57014.1
Membrane protein PslK; See PMID:20190049 for expression data; similar to GP:8052418; identified by sequence similarity; putative.
     
 0.883
Your Current Organism:
Pseudomonas syringae tomato
NCBI taxonomy Id: 223283
Other names: P. syringae pv. tomato str. DC3000, Pseudomonas syringae DC3000, Pseudomonas syringae pv. tomato DC3000, Pseudomonas syringae pv. tomato str. ATCC BAA-871, Pseudomonas syringae pv. tomato str. DC3000
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