Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AAO57053.1Conserved protein of unknown function; See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF00188. (293 aa)    
Predicted Functional Partners:
AAO57054.1
Methyl-accepting chemotaxis protein; See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF00672.
       0.485
AAO57055.1
Acetyltransferase, GNAT family; Identified by match to PFAM protein family HMM PF00583.
       0.474
AAO53673.1
Peptidase, M16 family; Identified by match to PFAM protein family HMM PF00675.
 
     0.430
algX
Alginate biosynthesis protein AlgX; Plays two roles in the biosynthesis of the exopolysaccharide alginate: protects alginate from degradation as the polymer traverses the periplasm, and also plays a role in its O-acetylation. Probably has acetyltransferase activity in vivo (By similarity).
  
     0.424
AAO58386.1
HAMP domain protein; See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF00672.
  
     0.411
AAO55767.1
Conserved protein of unknown function; See PMID:20190049 for expression data; identified by Glimmer.
  
     0.406
Your Current Organism:
Pseudomonas syringae tomato
NCBI taxonomy Id: 223283
Other names: P. syringae pv. tomato str. DC3000, Pseudomonas syringae DC3000, Pseudomonas syringae pv. tomato DC3000, Pseudomonas syringae pv. tomato str. ATCC BAA-871, Pseudomonas syringae pv. tomato str. DC3000
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