Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
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[Homology]
Score
AAO57057.1Ankyrin domain protein; Similar to GB:U09062, SP:P01762, PID:483866, PID:520409, PID:520410, PID:547523, PID:553456, PID:553461, PID:553463, PID:567113, PID:567114, PID:567115, and PID:976315; identified by sequence similarity; putative. (184 aa)    
Predicted Functional Partners:
cfa6
Coronafacic acid polyketide synthase I; This gene is the first of two multimodular polyketide synthetases involved in the biosynthesis of coronafacic acid. This synthetase is proposed to receive CPC (2-carboxy-2-cyclopentenone) from an acyl carrier protein (cfa1), it then adds a buyrate group and then completely reduces the ketone of the (former) carboxylate group. The resulting product is then passed to the second polyketide synthetase (cfa7); similar to GP:13346874; identified by sequence similarity; putative; see PMID:20190049 for expression data; This gene is the first of two multi [...]
  
 0.880
katB
Catalase; Similar to SP:P46206, GB:M11958, GB:M11959, GB:M11960, GB:M11961, GB:M11962, GB:M11963, GB:M11964, GB:M11965, GB:M11966, GB:M11967, GB:M11968, GB:L00159, GB:L00160, GB:S75476, GB:V00572, GB:D28371, SP:P00558, SP:P07205, PID:35435, PID:387020, and PID:387021; identified by sequence similarity; putative; Belongs to the catalase family.
 
 0.770
AAO55817.1
Serine/threonine protein kinase, putative.
   
 
 0.652
AAO57378.1
Cyclic nucleotide-binding protein; See PMID:20190049 for expression data; similar to GB:L07499, SP:P34918, and PID:410113; identified by sequence similarity; putative.
  
 
 0.640
AAO58108.1
Histone deacetylase family protein.
 
 
 0.640
ppiA
Peptidyl-prolyl cis-trans isomerase A; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
    
 0.605
AAO54070.1
Hypothetical protein; Identified by Glimmer2; putative.
    
 0.579
ndk
Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family.
    
 0.573
AAO56036.1
Peptidyl-prolyl cis-trans isomerase, FKBP-type; Similar to SP:P00144; identified by sequence similarity; putative.
    
 0.570
AAO57356.1
Peptidyl-prolyl cis-trans isomerase, FKBP-type; Identified by match to PFAM protein family HMM PF01346; see PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF01346.
    
 0.570
Your Current Organism:
Pseudomonas syringae tomato
NCBI taxonomy Id: 223283
Other names: P. syringae pv. tomato str. DC3000, Pseudomonas syringae DC3000, Pseudomonas syringae pv. tomato DC3000, Pseudomonas syringae pv. tomato str. ATCC BAA-871, Pseudomonas syringae pv. tomato str. DC3000
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