Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AAO57076.1Conserved protein of unknown function; See PMID:20190049 for expression data; identified by Glimmer. (201 aa)    
Predicted Functional Partners:
AAO57075.1
Conserved hypothetical protein; Identified by match to PFAM protein family HMM PF01292.
 
     0.808
AAO53799.1
Conserved hypothetical protein; Identified by Glimmer2; putative.
  
     0.592
AAO54886.1
Conserved protein of unknown function; See PMID:20190049 for expression data; similar to GP:8037804, and GP:8037804; identified by sequence similarity; putative.
  
     0.575
plcA1
Acid phosphatase; Similar to GP:7650483, and GP:8572766; identified by sequence similarity; putative.
  
     0.570
AAO57078.1
Heavy metal sensor histidine kinase; Member of a two-component regulatory system.
       0.552
AAO57077.1
DNA-binding heavy metal response regulator.
       0.530
AAO56028.1
Conserved hypothetical protein; Similar to SP:O87386; identified by sequence similarity; putative.
  
     0.511
AAO56798.1
Membrane protein, putative.
  
     0.511
AAO56025.1
Bacterial extracellular solute-binding domain protein; Similar to GP:15162210, and GP:8918683; identified by sequence similarity; putative.
  
     0.508
AAO57074.1
Oxidoreductase, molybdopterin-binding protein; See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF00174.
 
     0.501
Your Current Organism:
Pseudomonas syringae tomato
NCBI taxonomy Id: 223283
Other names: P. syringae pv. tomato str. DC3000, Pseudomonas syringae DC3000, Pseudomonas syringae pv. tomato DC3000, Pseudomonas syringae pv. tomato str. ATCC BAA-871, Pseudomonas syringae pv. tomato str. DC3000
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