Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
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[Homology]
Score
AAO57255.1Identified by match to PFAM protein family HMM PF04012; see PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF04012. (235 aa)    
Predicted Functional Partners:
AAO57256.1
Conserved protein of unknown function; See PMID:20190049 for expression data; identified by Glimmer.
 
  
 0.997
AAO57252.1
Conserved protein of unknown function; See PMID:20190049 for expression data; similar to SP:P39293, and SP:P39293; identified by sequence similarity; putative.
 
     0.879
AAO57253.1
Potassium channel protein, putative; See PMID:20190049 for expression data; similar to SP:P31069; identified by sequence similarity; putative.
 
   
 0.860
AAO57254.1
Rhomboid family protein; See PMID:20190049 for expression data; similar to GB:M33653, GB:M20795, GB:M20805, GB:M20802, GB:M20801, GB:M20800, GB:M20799, GB:M20798, GB:M20797, GB:M20796, GB:M20804, GB:M20803, GB:M59217, PID:178320, and PID:180831; identified by sequence similarity; putative.
 
     0.826
AAO57250.1
Conserved protein of unknown function; See PMID:20190049 for expression data; identified by Glimmer.
 
     0.765
AAO57251.1
Conserved protein of unknown function; See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF03994.
 
     0.716
gacS
Sensor histidine kinase/response regulator GacS.
    
 
 0.706
AAO57249.1
Glutathionylspermidine synthase family protein; See PMID:20190049 for expression data; similar to GP:15978750, and SP:P43675; identified by sequence similarity; putative.
 
   
 0.649
AAO55003.1
Sensory box histidine kinase/response regulator; Similar to GB:L07555, GB:Z30426, GB:Z30430, GB:Z30427, GB:Z30429, GB:Z30428, SP:Q07108, PID:291898, PID:397939, and PID:558352; identified by sequence similarity; putative.
    
 
 0.644
AAO55830.1
Sensor histidine kinase/response regulator.
    
 
 0.644
Your Current Organism:
Pseudomonas syringae tomato
NCBI taxonomy Id: 223283
Other names: P. syringae pv. tomato str. DC3000, Pseudomonas syringae DC3000, Pseudomonas syringae pv. tomato DC3000, Pseudomonas syringae pv. tomato str. ATCC BAA-871, Pseudomonas syringae pv. tomato str. DC3000
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