Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AAO57607.1DNA-binding response regulator, LuxR family; Identified by match to TIGR protein family HMM TIGR01387. (208 aa)    
Predicted Functional Partners:
AAO55003.1
Sensory box histidine kinase/response regulator; Similar to GB:L07555, GB:Z30426, GB:Z30430, GB:Z30427, GB:Z30429, GB:Z30428, SP:Q07108, PID:291898, PID:397939, and PID:558352; identified by sequence similarity; putative.
 
 
 0.992
AAO55840.1
Extracellular solute-binding protein/sensory box protein.
 
 
 0.953
AAO54101.1
Sensory box histidine kinase.
 
 
 0.880
gacS
Sensor histidine kinase/response regulator GacS.
 
 
 
 0.817
AAO57606.1
Hypothetical protein; Identified by Glimmer2; putative.
       0.773
AAO55648.1
Sensor histidine kinase; See PMID:20190049 for expression data.
 
     0.743
AAO55326.1
DNA-binding response regulator; See PMID:20190049 for expression data; identified by match to TIGR protein family HMM TIGR01818.
  
 
 0.677
AAO55645.1
Response regulator.
  
 
   0.672
AAO55830.1
Sensor histidine kinase/response regulator.
 
 
 
 0.645
AAO55739.1
DNA-binding response regulator; See PMID:20190049 for expression data.
  
 
 
 0.639
Your Current Organism:
Pseudomonas syringae tomato
NCBI taxonomy Id: 223283
Other names: P. syringae pv. tomato str. DC3000, Pseudomonas syringae DC3000, Pseudomonas syringae pv. tomato DC3000, Pseudomonas syringae pv. tomato str. ATCC BAA-871, Pseudomonas syringae pv. tomato str. DC3000
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