Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AAO57622.1ybaK/ebsC protein; See PMID:20190049 for expression data; similar to SP:P21484; identified by sequence similarity; putative; Belongs to the prolyl-tRNA editing family. YbaK/EbsC subfamily. (156 aa)    
Predicted Functional Partners:
glpK
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family.
  
  
 0.740
glpD
Glycerol-3-phosphate dehydrogenase; See PMID:20190049 for expression data; similar to SP:O83004; identified by sequence similarity; putative; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
  
  
 0.722
glpR
Glycerol-3-phosphate regulon repressor; See PMID:20190049 for expression data; similar to SP:Q51391; identified by sequence similarity; putative.
     
 0.651
glpF
Glycerol uptake facilitator protein; Similar to SP:P11244; identified by sequence similarity; putative; Belongs to the MIP/aquaporin (TC 1.A.8) family.
  
  
 0.617
Your Current Organism:
Pseudomonas syringae tomato
NCBI taxonomy Id: 223283
Other names: P. syringae pv. tomato str. DC3000, Pseudomonas syringae DC3000, Pseudomonas syringae pv. tomato DC3000, Pseudomonas syringae pv. tomato str. ATCC BAA-871, Pseudomonas syringae pv. tomato str. DC3000
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