Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
AAO57647.1Conserved hypothetical protein; Identified by match to PFAM protein family HMM PF00905. (1045 aa)    
Predicted Functional Partners:
AAO57649.1
Iron utilization protein, putative; Similar to SP:Q56646, GB:D10483, SP:P08203, GB:M15263, GB:M62646, GB:X56048, PID:145306, PID:147317, PID:216481, PID:40939, GB:U00096, and PID:1786247; identified by sequence similarity; putative.
     
 0.644
AAO58717.1
Conserved protein of unknown function; See PMID:20190049 for expression data.
      
 0.632
AAO55784.1
Identified by match to PFAM protein family HMM PF03734; see PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF03734.
      
 0.624
AAO57648.1
Conserved hypothetical protein; Similar to GP:15978937; identified by sequence similarity; putative.
       0.614
AAO58786.1
Conserved hypothetical protein; Identified by Glimmer2; putative.
  
     0.485
AAO55145.1
Conserved protein of unknown function; See PMID:20190049 for expression data.
  
     0.469
rlpA-2
Lipoprotein, rlpA family; Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides.
   
 
 0.464
AAO55284.1
Conserved hypothetical protein; Identified by Glimmer2; putative.
  
     0.417
AAO55146.1
Conserved hypothetical protein; Similar to GP:15488041; identified by sequence similarity; putative.
  
     0.410
Your Current Organism:
Pseudomonas syringae tomato
NCBI taxonomy Id: 223283
Other names: P. syringae pv. tomato str. DC3000, Pseudomonas syringae DC3000, Pseudomonas syringae pv. tomato DC3000, Pseudomonas syringae pv. tomato str. ATCC BAA-871, Pseudomonas syringae pv. tomato str. DC3000
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