Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AAO57688.1TctC protein, putative; Similar to GP:11128402; identified by sequence similarity; putative. (325 aa)    
Predicted Functional Partners:
AAO57689.1
Membrane protein TctB, putative; Similar to GP:11128403; identified by sequence similarity; putative.
 
  
 0.987
AAO57690.1
Membrane protein TctA, putative; Similar to GP:11128404, and GP:11128404; identified by sequence similarity; putative.
 
  
 0.987
AAO57691.1
Membrane protein, putative; Similar to GP:3164104; identified by sequence similarity; putative.
 
    0.880
AAO57686.1
Sensor histidine kinase TctE.
 
   
 0.670
AAO56755.1
Membrane protein, putative; Similar to SP:P75747; identified by sequence similarity; putative.
 
    0.660
tctD
DNA-binding response regulator TctD; See PMID:20190049 for expression data.
       0.533
AAO54581.1
TRAP dicarboxylate transporter, DctQ subunit, putative.
  
     0.503
Your Current Organism:
Pseudomonas syringae tomato
NCBI taxonomy Id: 223283
Other names: P. syringae pv. tomato str. DC3000, Pseudomonas syringae DC3000, Pseudomonas syringae pv. tomato DC3000, Pseudomonas syringae pv. tomato str. ATCC BAA-871, Pseudomonas syringae pv. tomato str. DC3000
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