Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AAO57695.1ABC transporter, permease protein. (271 aa)    
Predicted Functional Partners:
AAO57694.1
ABC transporter, periplasmic substrate-binding protein.
 
 
 0.978
AAO57696.1
ABC transporter, ATP-binding protein.
 
     0.970
AAO57697.1
Conserved hypothetical protein; Identified by Glimmer2; putative.
 
   
 0.968
AAO57698.1
Conserved hypothetical protein; Identified by Glimmer2; putative.
 
     0.936
AAO57699.1
Urea amidolyase-related protein; Similar to GP:5457424, and SP:P32528; identified by sequence similarity; putative.
 
     0.925
AAO57700.1
Amidase family protein; Similar to GP:13022192; identified by sequence similarity; putative.
 
     0.861
tauB
Taurine ABC transporter, ATP-binding protein; Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Taurine importer (TC 3.A.1.17.1) family.
 
  
 0.838
tauA
Taurine ABC transporter, periplasmic taurine-binding protein; Similar to SP:Q47537; identified by sequence similarity; putative.
 
  
 0.808
AAO54883.1
Identified by match to TIGR protein family HMM TIGR00132.
 
     0.742
ssuB2
ABC transporter, ATP-binding protein; Part of the ABC transporter complex SsuABC involved in aliphatic sulfonates import. Responsible for energy coupling to the transport system.
 
 
 0.704
Your Current Organism:
Pseudomonas syringae tomato
NCBI taxonomy Id: 223283
Other names: P. syringae pv. tomato str. DC3000, Pseudomonas syringae DC3000, Pseudomonas syringae pv. tomato DC3000, Pseudomonas syringae pv. tomato str. ATCC BAA-871, Pseudomonas syringae pv. tomato str. DC3000
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