Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AAO57817.1Lipoprotein, putative; See PMID:20190049 for expression data. (475 aa)    
Predicted Functional Partners:
AAO57818.1
Lipoprotein, putative; See PMID:20190049 for expression data.
 
  
 0.990
AAO57819.1
Lipoprotein, putative; See PMID:20190049 for expression data.
 
  
 0.987
AAO57816.1
Iron-regulated protein A, putative; See PMID:20190049 for expression data.
 
    0.971
hemE
Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III.
      
 0.744
AAO56363.1
TspO/MBR family protein; Similar to GB:D43951, and PID:603957; identified by sequence similarity; putative.
     
 0.551
AAO53859.1
Iron ABC transporter, periplasmic iron-binding protein; See PMID:20190049 for expression data.
 
    0.547
murC
UDP-N-acetylmuramate--alanine ligase; Cell wall formation; Belongs to the MurCDEF family.
      
 0.524
AAO55623.1
Thiamine biosynthesis lipoprotein, putative; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. Belongs to the ApbE family.
  
    0.502
phrB
Deoxyribodipyrimidine photolyase; See PMID:20190049 for expression data; Belongs to the DNA photolyase family.
      
 0.498
oprF
Outer membrane porin OprF; See PMID:20190049 for expression data.
      
 0.497
Your Current Organism:
Pseudomonas syringae tomato
NCBI taxonomy Id: 223283
Other names: P. syringae pv. tomato str. DC3000, Pseudomonas syringae DC3000, Pseudomonas syringae pv. tomato DC3000, Pseudomonas syringae pv. tomato str. ATCC BAA-871, Pseudomonas syringae pv. tomato str. DC3000
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.