Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AAO57830.1Oxidoreductase, short chain dehydrogenase/reductase family; Identified by match to TIGR protein family HMM TIGR01831; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (252 aa)    
Predicted Functional Partners:
fabF
3-oxoacyl-(acyl-carrier-protein) synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.
 
 0.951
fabZ
Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ; Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs.
 
 
 0.946
AAO58537.1
3-oxoacyl-(acyl-carrier-protein) synthase II, putative; See PMID:20190049 for expression data; similar to SP:P39435; identified by sequence similarity; putative; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
 
 0.943
fabB
3-oxoacyl-(acyl-carrier-protein) synthase I; Similar to SP:P14926, GB:M33563, SP:P19911, SP:P19912, PID:141909, and PID:901869; identified by sequence similarity; putative; see PMID:20190049 for expression data; similar to SP:P14926, GB:M33563, SP:P19911, SP:P19912, PID:141909, and PID:901869, identified by sequence similarity, putative; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
 
 0.942
AAO58534.1
3-oxoacyl-(acyl-carrier-protein) synthase II, putative; Similar to SP:P39435; identified by sequence similarity; putative; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
 
 0.941
AAO55434.1
3-oxoacyl-(acyl-carrier-protein) synthase III, putative; See PMID:20190049 for expression data; similar to GP:13183737, and SP:Q07510; identified by sequence similarity; putative.
 
 
 0.923
AAO55466.1
3-oxoacyl-(acyl-carrier-protein) synthase III, putative; See PMID:20190049 for expression data; similar to SP:Q07510; identified by sequence similarity; putative.
 
 
 0.921
fabA
Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA; Necessary for the introduction of cis unsaturation into fatty acids. Catalyzes the dehydration of (3R)-3-hydroxydecanoyl-ACP to E- (2)-decenoyl-ACP and then its isomerization to Z-(3)-decenoyl-ACP. Can catalyze the dehydratase reaction for beta-hydroxyacyl-ACPs with saturated chain lengths up to 16:0, being most active on intermediate chain length.
  
 
 0.907
phbA-2
acetyl-CoA acetyltransferase; See PMID:20190049 for expression data; similar to SP:P45359; identified by sequence similarity; putative; Belongs to the thiolase-like superfamily. Thiolase family.
  
 
 0.768
fadB
Fatty oxidation complex, alpha subunit; Involved in the aerobic and anaerobic degradation of long- chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate. In the C-terminal section; belongs to the 3-hydroxyacyl-CoA dehydrogenase family.
  
 0.752
Your Current Organism:
Pseudomonas syringae tomato
NCBI taxonomy Id: 223283
Other names: P. syringae pv. tomato str. DC3000, Pseudomonas syringae DC3000, Pseudomonas syringae pv. tomato DC3000, Pseudomonas syringae pv. tomato str. ATCC BAA-871, Pseudomonas syringae pv. tomato str. DC3000
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.