Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AAO57894.1Mce-related protein; See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF02470. (155 aa)    
Predicted Functional Partners:
AAO57895.1
Membrane protein, putative; See PMID:20190049 for expression data; identified by match to TIGR protein family HMM TIGR00056.
 
 0.999
AAO57896.1
Toluene tolerance ABC transporter, ATP-binding protein, putative; See PMID:20190049 for expression data; similar to GP:4336798; identified by sequence similarity; putative.
 
 0.999
AAO57893.1
Toluene tolerance protein, putative; Similar to GP:4336801, and GP:4336801; identified by sequence similarity; putative; see PMID:20190049 for expression data; similar to GP:4336801, and GP:4336801, identified by sequence similarity, putative.
 
 0.998
AAO57892.1
STAS domain protein; See PMID:20190049 for expression data; similar to GP:4336802; identified by sequence similarity; putative.
  
 0.993
AAO55140.1
Conserved protein of unknown function; See PMID:20190049 for expression data.
 
   
 0.899
AAO55632.1
vacJ lipoprotein, putative; See PMID:20190049 for expression data.
 
   
 0.815
AAO57891.1
Toluene tolerance protein, putative; See PMID:20190049 for expression data; similar to GP:4336803; identified by sequence similarity; putative; Belongs to the BolA/IbaG family.
     
 0.766
lptC
Conserved protein of unknown function; Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. Facilitates the transfer of LPS from the inner membrane to the periplasmic protein LptA. Could be a docking site for LptA.
  
  
 0.758
lptA
ostA family protein; Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm.
  
  
 0.751
murA
UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily.
     
 0.723
Your Current Organism:
Pseudomonas syringae tomato
NCBI taxonomy Id: 223283
Other names: P. syringae pv. tomato str. DC3000, Pseudomonas syringae DC3000, Pseudomonas syringae pv. tomato DC3000, Pseudomonas syringae pv. tomato str. ATCC BAA-871, Pseudomonas syringae pv. tomato str. DC3000
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