Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AAO57907.1Protein of unknown function; See PMID:20190049 for expression data; identified by Glimmer. (42 aa)    
Predicted Functional Partners:
sodA
Superoxide dismutase, Mn; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
  
  
 0.895
AAO57909.1
Conserved protein of unknown function; See PMID:20190049 for expression data; similar to GP:4581921, and GP:4704563; identified by sequence similarity; putative.
  
    0.892
AAO57911.1
Conserved protein of unknown function; See PMID:20190049 for expression data; identified by Glimmer.
  
    0.778
fumC-2
Fumarate hydratase, class II; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily.
  
    0.744
AAO58026.1
Conserved protein of unknown function; See PMID:20190049 for expression data; identified by Glimmer.
   
    0.508
AAO57649.1
Iron utilization protein, putative; Similar to SP:Q56646, GB:D10483, SP:P08203, GB:M15263, GB:M62646, GB:X56048, PID:145306, PID:147317, PID:216481, PID:40939, GB:U00096, and PID:1786247; identified by sequence similarity; putative.
   
    0.477
AAO54656.1
Conserved protein of unknown function; See PMID:20190049 for expression data; identified by match to TIGR protein family HMM TIGR01777.
  
    0.440
pmbA
pmbA protein; Similar to SP:P24231; identified by sequence similarity; putative; see PMID:20190049 for expression data; similar to SP:P24231, identified by sequence similarity, putative.
       0.437
sodB
Superoxide dismutase, Fe; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
  
  
 0.401
Your Current Organism:
Pseudomonas syringae tomato
NCBI taxonomy Id: 223283
Other names: P. syringae pv. tomato str. DC3000, Pseudomonas syringae DC3000, Pseudomonas syringae pv. tomato DC3000, Pseudomonas syringae pv. tomato str. ATCC BAA-871, Pseudomonas syringae pv. tomato str. DC3000
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