Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AAO58026.1Conserved protein of unknown function; See PMID:20190049 for expression data; identified by Glimmer. (80 aa)    
Predicted Functional Partners:
AAO57909.1
Conserved protein of unknown function; See PMID:20190049 for expression data; similar to GP:4581921, and GP:4704563; identified by sequence similarity; putative.
   
    0.761
sodA
Superoxide dismutase, Mn; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
   
    0.753
AAO57911.1
Conserved protein of unknown function; See PMID:20190049 for expression data; identified by Glimmer.
   
    0.745
AAO57649.1
Iron utilization protein, putative; Similar to SP:Q56646, GB:D10483, SP:P08203, GB:M15263, GB:M62646, GB:X56048, PID:145306, PID:147317, PID:216481, PID:40939, GB:U00096, and PID:1786247; identified by sequence similarity; putative.
   
    0.644
ispB
Octylprenyl diphosphate synthase; See PMID:20190049 for expression data; Belongs to the FPP/GGPP synthase family.
     
 0.603
rplU
Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.
       0.532
rpmA
Ribosomal protein L27; See PMID:20190049 for expression data; Belongs to the bacterial ribosomal protein bL27 family.
       0.520
AAO55571.1
Membrane protein, putative.
   
    0.508
AAO57907.1
Protein of unknown function; See PMID:20190049 for expression data; identified by Glimmer.
   
    0.508
Your Current Organism:
Pseudomonas syringae tomato
NCBI taxonomy Id: 223283
Other names: P. syringae pv. tomato str. DC3000, Pseudomonas syringae DC3000, Pseudomonas syringae pv. tomato DC3000, Pseudomonas syringae pv. tomato str. ATCC BAA-871, Pseudomonas syringae pv. tomato str. DC3000
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.