AAO58052.1 protein (Pseudomonas syringae tomato)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

AAO58052.1

Conserved protein of unknown function; See PMID:20190049 for expression data; identified by Glimmer. (132 aa)

Predicted Functional Partners:

AAO58049.1

0.812

AAO58050.1

0.812

AAO58051.1

0.812

AAO58048.1

0.534

Your Current Organism:

Pseudomonas syringae tomato

NCBI taxonomy Id: 223283
Other names: P. syringae pv. tomato str. DC3000, Pseudomonas syringae DC3000, Pseudomonas syringae pv. tomato DC3000, Pseudomonas syringae pv. tomato str. ATCC BAA-871, Pseudomonas syringae pv. tomato str. DC3000

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AAO58048.1	AAO58049.1	PSPTO_4602	PSPTO_4603	ABC transporter, ATP-binding protein; Similar to GP:9950844, and SP:P37797; identified by sequence similarity; putative; see PMID:20190049 for expression data; similar to GP:9950844, and SP:P37797, identified by sequence similarity, putative.	Site-specific recombinase, phage integrase family; See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF00589.	0.534
AAO58048.1	AAO58050.1	PSPTO_4602	PSPTO_4604	ABC transporter, ATP-binding protein; Similar to GP:9950844, and SP:P37797; identified by sequence similarity; putative; see PMID:20190049 for expression data; similar to GP:9950844, and SP:P37797, identified by sequence similarity, putative.	Site-specific recombinase, phage integrase family; See PMID:20190049 for expression data; identified by match to TIGR protein family HMM TIGR01834.	0.534
AAO58048.1	AAO58051.1	PSPTO_4602	PSPTO_4605	ABC transporter, ATP-binding protein; Similar to GP:9950844, and SP:P37797; identified by sequence similarity; putative; see PMID:20190049 for expression data; similar to GP:9950844, and SP:P37797, identified by sequence similarity, putative.	Conserved protein of unknown function; See PMID:20190049 for expression data; identified by Glimmer.	0.534
AAO58048.1	AAO58052.1	PSPTO_4602	PSPTO_4606	ABC transporter, ATP-binding protein; Similar to GP:9950844, and SP:P37797; identified by sequence similarity; putative; see PMID:20190049 for expression data; similar to GP:9950844, and SP:P37797, identified by sequence similarity, putative.	Conserved protein of unknown function; See PMID:20190049 for expression data; identified by Glimmer.	0.534
AAO58049.1	AAO58048.1	PSPTO_4603	PSPTO_4602	Site-specific recombinase, phage integrase family; See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF00589.	ABC transporter, ATP-binding protein; Similar to GP:9950844, and SP:P37797; identified by sequence similarity; putative; see PMID:20190049 for expression data; similar to GP:9950844, and SP:P37797, identified by sequence similarity, putative.	0.534
AAO58049.1	AAO58050.1	PSPTO_4603	PSPTO_4604	Site-specific recombinase, phage integrase family; See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF00589.	Site-specific recombinase, phage integrase family; See PMID:20190049 for expression data; identified by match to TIGR protein family HMM TIGR01834.	0.877
AAO58049.1	AAO58051.1	PSPTO_4603	PSPTO_4605	Site-specific recombinase, phage integrase family; See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF00589.	Conserved protein of unknown function; See PMID:20190049 for expression data; identified by Glimmer.	0.970
AAO58049.1	AAO58052.1	PSPTO_4603	PSPTO_4606	Site-specific recombinase, phage integrase family; See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF00589.	Conserved protein of unknown function; See PMID:20190049 for expression data; identified by Glimmer.	0.812
AAO58050.1	AAO58048.1	PSPTO_4604	PSPTO_4602	Site-specific recombinase, phage integrase family; See PMID:20190049 for expression data; identified by match to TIGR protein family HMM TIGR01834.	ABC transporter, ATP-binding protein; Similar to GP:9950844, and SP:P37797; identified by sequence similarity; putative; see PMID:20190049 for expression data; similar to GP:9950844, and SP:P37797, identified by sequence similarity, putative.	0.534
AAO58050.1	AAO58049.1	PSPTO_4604	PSPTO_4603	Site-specific recombinase, phage integrase family; See PMID:20190049 for expression data; identified by match to TIGR protein family HMM TIGR01834.	Site-specific recombinase, phage integrase family; See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF00589.	0.877
AAO58050.1	AAO58051.1	PSPTO_4604	PSPTO_4605	Site-specific recombinase, phage integrase family; See PMID:20190049 for expression data; identified by match to TIGR protein family HMM TIGR01834.	Conserved protein of unknown function; See PMID:20190049 for expression data; identified by Glimmer.	0.884
AAO58050.1	AAO58052.1	PSPTO_4604	PSPTO_4606	Site-specific recombinase, phage integrase family; See PMID:20190049 for expression data; identified by match to TIGR protein family HMM TIGR01834.	Conserved protein of unknown function; See PMID:20190049 for expression data; identified by Glimmer.	0.812
AAO58051.1	AAO58048.1	PSPTO_4605	PSPTO_4602	Conserved protein of unknown function; See PMID:20190049 for expression data; identified by Glimmer.	ABC transporter, ATP-binding protein; Similar to GP:9950844, and SP:P37797; identified by sequence similarity; putative; see PMID:20190049 for expression data; similar to GP:9950844, and SP:P37797, identified by sequence similarity, putative.	0.534
AAO58051.1	AAO58049.1	PSPTO_4605	PSPTO_4603	Conserved protein of unknown function; See PMID:20190049 for expression data; identified by Glimmer.	Site-specific recombinase, phage integrase family; See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF00589.	0.970
AAO58051.1	AAO58050.1	PSPTO_4605	PSPTO_4604	Conserved protein of unknown function; See PMID:20190049 for expression data; identified by Glimmer.	Site-specific recombinase, phage integrase family; See PMID:20190049 for expression data; identified by match to TIGR protein family HMM TIGR01834.	0.884
AAO58051.1	AAO58052.1	PSPTO_4605	PSPTO_4606	Conserved protein of unknown function; See PMID:20190049 for expression data; identified by Glimmer.	Conserved protein of unknown function; See PMID:20190049 for expression data; identified by Glimmer.	0.812
AAO58052.1	AAO58048.1	PSPTO_4606	PSPTO_4602	Conserved protein of unknown function; See PMID:20190049 for expression data; identified by Glimmer.	ABC transporter, ATP-binding protein; Similar to GP:9950844, and SP:P37797; identified by sequence similarity; putative; see PMID:20190049 for expression data; similar to GP:9950844, and SP:P37797, identified by sequence similarity, putative.	0.534
AAO58052.1	AAO58049.1	PSPTO_4606	PSPTO_4603	Conserved protein of unknown function; See PMID:20190049 for expression data; identified by Glimmer.	Site-specific recombinase, phage integrase family; See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF00589.	0.812
AAO58052.1	AAO58050.1	PSPTO_4606	PSPTO_4604	Conserved protein of unknown function; See PMID:20190049 for expression data; identified by Glimmer.	Site-specific recombinase, phage integrase family; See PMID:20190049 for expression data; identified by match to TIGR protein family HMM TIGR01834.	0.812
AAO58052.1	AAO58051.1	PSPTO_4606	PSPTO_4605	Conserved protein of unknown function; See PMID:20190049 for expression data; identified by Glimmer.	Conserved protein of unknown function; See PMID:20190049 for expression data; identified by Glimmer.	0.812

Server load: low (10%) [HD]

Permalink

Network

Neighborhood

Textmining

Co-occurrence

Experiments

Fusion

Databases

Co-expression

© STRING Consortium 2026

Credits

Access

Info

About