Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AAO58334.1Bacterioferritin, putative. (179 aa)    
Predicted Functional Partners:
bfr
Bacterioferritin; Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex; Belongs to the bacterioferritin family.
  
  
  0.949
AAO54195.1
Bacterioferritin; Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex; Belongs to the bacterioferritin family.
  
  
  0.936
hemH
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family.
     
 0.909
AAO54807.1
Heme oxygenase, putative; See PMID:20190049 for expression data.
     
  0.900
era
GTP-binding protein Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism.
     
 0.812
AAO55027.1
Conserved protein of unknown function; See PMID:20190049 for expression data.
 
    0.682
AAO55116.1
Conserved protein of unknown function; See PMID:20190049 for expression data; similar to GP:14524290; identified by sequence similarity; putative; Belongs to the UPF0337 (CsbD) family.
  
  
 0.611
AAO57615.1
Bacterioferritin-associated ferredoxin; See PMID:20190049 for expression data; similar to GP:4378826, and SP:P13655; identified by sequence similarity; putative.
  
 
 0.583
AAO56659.1
Conserved protein of unknown function; See PMID:20190049 for expression data; identified by Glimmer.
  
    0.579
AAO56213.1
Sensor histidine kinase/response regulator; See PMID:20190049 for expression data; identified by match to TIGR protein family HMM TIGR01817.
   
  
 0.531
Your Current Organism:
Pseudomonas syringae tomato
NCBI taxonomy Id: 223283
Other names: P. syringae pv. tomato str. DC3000, Pseudomonas syringae DC3000, Pseudomonas syringae pv. tomato DC3000, Pseudomonas syringae pv. tomato str. ATCC BAA-871, Pseudomonas syringae pv. tomato str. DC3000
Server load: low (16%) [HD]