Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AAO58336.1Transcriptional regulator, TetR family; See PMID:20190049 for expression data. (210 aa)    
Predicted Functional Partners:
plsB
Glycerol-3-phosphate acyltransferase; See PMID:20190049 for expression data; Belongs to the GPAT/DAPAT family.
  
   
 0.742
ureE
Urease accessory protein UreE; Involved in urease metallocenter assembly. Binds nickel. Probably functions as a nickel donor during metallocenter assembly. Belongs to the UreE family.
       0.730
ureF-2
Urease accessory protein UreF; Required for maturation of urease via the functional incorporation of the urease nickel metallocenter.
       0.730
AAO53850.1
Fatty acid desaturase; See PMID:20190049 for expression data.
     
 0.698
AAO58340.1
Urease accessory protein, putative; See PMID:20190049 for expression data; similar to GB:J04970, SP:P14384, and PID:179932; identified by sequence similarity; putative.
       0.698
fabB
3-oxoacyl-(acyl-carrier-protein) synthase I; Similar to SP:P14926, GB:M33563, SP:P19911, SP:P19912, PID:141909, and PID:901869; identified by sequence similarity; putative; see PMID:20190049 for expression data; similar to SP:P14926, GB:M33563, SP:P19911, SP:P19912, PID:141909, and PID:901869, identified by sequence similarity, putative; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
      
 0.636
AAO56227.1
Conserved protein of unknown function; See PMID:20190049 for expression data; similar to GP:9947817; identified by sequence similarity; putative.
  
     0.604
AAO58335.1
Conserved hypothetical protein; Identified by Glimmer2; putative.
       0.587
AAO54285.1
Oxidoreductase, short chain dehydrogenase/reductase family.
  
     0.568
AAO54284.1
MaoC-like domain protein.
  
     0.552
Your Current Organism:
Pseudomonas syringae tomato
NCBI taxonomy Id: 223283
Other names: P. syringae pv. tomato str. DC3000, Pseudomonas syringae DC3000, Pseudomonas syringae pv. tomato DC3000, Pseudomonas syringae pv. tomato str. ATCC BAA-871, Pseudomonas syringae pv. tomato str. DC3000
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