Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
motBChemotaxis motB protein; See PMID:20190049 for expression data. (341 aa)    
Predicted Functional Partners:
motA-2
Chemotaxis motA protein; See PMID:20190049 for expression data.
 
 0.999
motA-1
Chemotaxis motA protein; See PMID:20190049 for expression data; similar to SP:P28611; identified by sequence similarity; putative; see PMID:20190049 for expression data; similar to SP:P28611, identified by sequence similarity, putative.
 
 0.997
flgK
Flagellar hook-associated protein FlgK; See PMID:20190049 for expression data; similar to GP:13183733, and SP:P33235; identified by sequence similarity; putative; Belongs to the flagella basal body rod proteins family.
 
  
 0.985
fliS
Flagellar protein FliS; See PMID:20190049 for expression data; similar to SP:P26608; identified by sequence similarity; putative.
 
  
 0.972
flgC
Flagellar basal-body rod protein FlgC; See PMID:20190049 for expression data; similar to SP:P75935, GB:Z29327, and PID:441236; identified by sequence similarity; putative; Belongs to the flagella basal body rod proteins family.
 
  
 0.968
fliA
Motility sigma factor FliA; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor controls the expression of flagella-related genes; Belongs to the sigma-70 factor family. FliA subfamily.
 
  
 0.965
flgD
Basal-body rod modification protein FlgD; Required for flagellar hook formation. May act as a scaffolding protein.
 
  
 0.964
flgG
Flagellar basal-body rod protein FlgG; See PMID:20190049 for expression data; similar to SP:P75939, GB:M11186, GB:M62611, SP:P01178, PID:189411, PID:386991, and PID:825699; identified by sequence similarity; putative; Belongs to the flagella basal body rod proteins family.
 
 
 0.960
fliF
Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family.
 
  
 0.960
fliG
Flagellar motor switch protein FliG; FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation.
 
  
 0.958
Your Current Organism:
Pseudomonas syringae tomato
NCBI taxonomy Id: 223283
Other names: P. syringae pv. tomato str. DC3000, Pseudomonas syringae DC3000, Pseudomonas syringae pv. tomato DC3000, Pseudomonas syringae pv. tomato str. ATCC BAA-871, Pseudomonas syringae pv. tomato str. DC3000
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